Released - 2022-12-19

  • refactor: Update Dockerfile packages
    • Add grid, leaflet, sf, and cowplot
    • Remove rgdal and sp

Released - 2022-12-19

  • docs: Create new release version on GitHub

Released - 2022-12-19

  • docs: Update DESCRIPTION with missing packages (shinyalert and leaftlet)

Released - 2022-12-16

  • refactor: Modify source files to use CBP server
  • docs: Create new release version on GitHub

Released - 2022-12-16

  • refactor: Upload to Tt ShinyApps.io

Released - 2022-12-16

  • refactor: Update Help tab text

Released - 2022-12-15

  • refactor: Update Help tab text
  • refactor: Update Background tab (2nd paragraph) text

Released - 2022-12-06

  • refactor: Move data-raw file processing for 2019 to baytrends-files
    • Script and rda
  • feature: Add DC inset to static maps, Issue #75
  • docs: Add cowplot to Imports in DESCRIPTION

Released - 2022-07-21

  • refactor: Update DOCKERFILE

Released - 2022-07-21

  • docs: Update version number for a new release and posting of app to CBP

Released - 2022-07-21

  • refactor: CRAN check updates
  • docs: Add BugReports to DESCRIPTION

Released - 2022-07-21

  • refactor: Update remote data from GitHub to CBP, Issue #64

Released - 2022-07-19

  • fix: Update pop up modal so don’t get warning, Issue #74

Released - 2022-07-19

  • fix: Update bay shapefile datum on import in global.R, Issue #73

Released - 2022-07-19

  • fix: Update zoom feature for custom maps, Issue #72

Released - 2022-07-19

  • fix: Update linked plot from leaflet maps, Issue #71

Released - 2022-07-18

  • fix: Auto open custom map file ext to avoid failure on save

Released - 2022-07-18

  • fix: Change leaflet map plot links to show “no plot” for DIN and PO4

Released - 2022-07-18

  • fix: Use consistent terminology in all locations for Long Term, Issue #67
    • Included updates to “no plot” plot for dynamic map
    • Continuation of Issue #65
  • fix: Update typos on background tab, Issue #68
  • fix: Update saved maps to force white background, Issue #69
  • fix: Update text on map types, change map, triangles, Issue #70

Released - 2022-07-15

  • refactor: Modify data files from 6 to 4 options, Issue #65
  • refactor: Change location of data and plots to GitHub for testing, Issue #64

Released - 2022-07-15

  • refactor: Change spelling for consistency on Background tab, Issue #66

Released - 2022-07-14

  • refactor: Change location of data and plots linked to from map, Issue #64

Released - 2022-07-14

  • refactor: Format initial pop up text, Issue #62

Released - 2022-07-14

  • refactor: Update initial pop up icon, Issue #61

Released - 2022-07-14

  • refactor: Update background tab, Issue #63

Released - 2022-07-11

  • refactor: Update shiny help and background

Released - 2022-06-22

  • docs: Add contributors

Released - 2022-06-15

  • refactor: Update shiny help

Released - 2022-05-12

  • refactor: Update text on background tab, Issue #60

Released - 2022-05-12

  • refactor: Add pop up modal at start up, Issue #59
    • Add shinyalert package to DESCRIPTION and global.R

Released - 2022-05-09

  • refactor: Update shiny help

Released - 2022-05-09

  • refactor: Update shiny help

Released - 2022-04-27

  • update: Replace rgdal and sp packages with sf package, Issue #58
    • DESCRIPTION
    • ProcessData_GIS_cbseg.R
    • global.R
  • style: Remove “test” code at bottom of global.R

Released - 2022-03-23

  • refactor: Update shiny app
    • leaflet maps, add missing space after “GAM:”
    • Replace “trends” with “change” for map names

Released - 2022-03-07

  • refactor: Update shiny app
    • Basic maps
      • Load with default map when app opens
      • Save buttons for range and trend moved to map tab

Released - 2022-03-03

  • refactor: Update shiny app

Released - 2022-01-19

  • fix: Update URL for plots for interactive map, Issue #56

Released - 2022-01-19

  • refactor: Complete updates to Shiny interface
    • Basic download button
    • Enable/disable save buttons in Shiny to guide order of operations
    • DESCRIPTION, IMPORTS, add shinyjs package
  • style: Add style to some shiny code files

Released - 2022-01-18

  • refactor: Continued updates to Shiny interface
    • Split interface into basic and advanced
    • Link to Background PDF

Released - 2022-01-14

  • refactor: Update ‘filtered data summary’ table without rownames
  • style: Update outline of global.R
  • feature: Add default map
    • Uses first remote file and first mapLayer
  • refactor: Redesign Shiny interface
    • Interim version for testing online

Released - 2021-09-15

  • refactor: Update remote file directory structure, Issue #54 and Issue #50
    • Update remove file pick_files.csv with plot directory name
  • refactor: Update shiny to use new files

Released - 2021-08-17

  • feat: Added plot creation script for “no data” in Shiny leaflet map pop up, Issue #49

Released - 2021-08-17

  • refactor: Add remote data URL to global.R
  • refactor: Update data and plot URL to reference global.R for base URL
  • refactor: Update Trends leaflet map to use all plots for import
    • Previously tested only chla_S plots

Released - 2021-08-16

  • refactor: Update Shiny app to import data files from remote repo, Issue #54

Released - 2021-08-16

  • feat: Update Shiny app to auto update data import pick list from saved table, Issue #54

Released - 2021-08-09

  • fix: Update DESCRIPTION to accurately include second author
  • fix: Update range map in Shiny to use all categories when user supplies custom classes, Issue #51
  • docs: Update README to use remotes instead of devtools in install example

Released - 2021-06-09

  • refactor: Shiny lealfet map, change order of base layers
    • Make Positron the default

Released - 2021-06-04

  • feat: Add leaflet map as demonstration for trend map.
  • chrore: Fix filtering
  • style: Trim lines to 80 characters

Released - 2021-01-26

  • chore: Update to version 1.2.1 for release; Issue #45

Released - 2021-01-06

  • chore: Update trend (change) map color blind palette; Issue #46

Released - 2021-01-06

  • chore: Edit spelling of “palette” in shiny app map pages

Released - 2021-01-06

  • chore: Add ability to select colors for change (trend) map; Issue #46
  • chore: Add .groups = “drop_last” to summarize to avoid warning message

Released - 2021-01-04

  • chore: Update version number and create release on GitHub

Released - 2021-01-04

  • chore: Move docker and buildspec.yml back to root folder
  • chore: Add docker and buildspec.yml to .Rbuildignore

Released - 2021-01-04

  • chore: Remove docs (pkgdown) folder from root

Released - 2021-01-04

  • refactor: lintr clean up
  • docs: DESCRIPTION add + file LICENSE
  • refactor: Add non-standard files/folders to .Rbuildignore
    • folder data-raw
    • NEWS.rmd
    • README.html
    • shiny rsconnect folder
  • chore: Move files from root to inst folder
    • buildspec.yml
    • Dockerfile
  • docs: Document data_GIS_cbpseg in Data.R
  • chore: Add GitHub Action, CMD check
  • chore: Add GitHub Action, pkgdown
  • chore: Remove _pkgdown.yaml from root directory
  • docs: Add badges to README
  • style: Trim lines to 80 characters, run_shiny.R

Released - 2020-12-18

  • Replace “final” data with revised 2019 data; Issue #44
  • Update text on Shiny app sidebar (6 instead of 4 radio buttons); Issue #44
  • Widened sidebar for select data so no wrapping of radio button choices.

Released - 2020-07-16

  • Update help file for occassional bad file import; Issue #40

Released - 2020-07-16

  • Update column widths in data tables (import and filter); Issue #39

Released - 2020-07-15

  • Update maps to use defaults if no map options selected; Issue #23
    • Avoids map creation error.
    • Range and Change maps.

Released - 2020-07-09

  • Update version number after merging in development branch; Issue #37
  • Create a “release” on github.
  • Upload latest version to Shiny.io.

Released - 2020-07-07

  • Update map legend code; Issue #27
    • User/final files and range/change maps.

Released - 2020-07-06

  • Change name of change map file; Issue #33
    • Replace “trend” with “change”.
    • Internal and download file.

Released - 2020-07-06

  • Change map output size; Issue #26
    • server.R
      • Modified range and change maps to use values set in global.R
    • global.R
      • plot_h <- 9
      • plot_w <- plot_h/map_coord_ratio
      • plot_units <- “in”
      • plot_scale <- 1.25
      • Use map_coord_ratio so has the same value as coord_fixed when create plots.

Released - 2020-07-06

  • Unwind change to DESCRIPTION URL and packageVersion() in global.R.
    • Unable to get Shinyapps.io to use the development branch when installing.

Released - 2020-07-06

  • DESCRIPTION
    • Modify URL for Shiny since using development not main branch.

Released - 2020-07-06

  • global.R
    • Use packageVersion() instead of manually setting the version.
    • Tests failed before when on Shinyapps.io.

Released - 2020-07-06

  • Loaded file type text, official to final; Issue #35.
    • server.R

Released - 2020-07-01

  • Map tabs move save button to top of column alongside apply button.

Released - 2020-07-01

  • Modify range map to included lowest value in legend; Issue #8 and #30

Released - 2020-06-30

  • Update filters to sort unique values; Issue #28

Released - 2020-06-30

  • Modify auto-generated map titles (range and change) for ‘user’ files; Issue #27

Released - 2020-06-30

  • Range map; Issue #34
    • Fix spelling for palette.

Released - 2020-06-30

  • Modify trend map tab; Issue #33

Released - 2020-06-29

  • Revised “final” data files; Issue #26

Released - 2020-06-29

  • Modify auto-generated map titles (range and change) for ‘final’ files; Issue #27

Released - 2020-06-29

  • Modify help file; Issue #29

Released - 2020-06-29

  • Modify filter tab; Issue #32
  • Modify trend map tab; Issue #33
    • Left variables beyond filename as ‘trend’.

Released - 2020-06-24

  • Modify help file; Issue #29

Released - 2020-06-24

  • Modify data tab; Issue #31
  • Modify filter tab title; Issue #32

Released - 2020-06-24

  • Modify filter tab; Issue #32

Released - 2020-06-17

Increase file size from 10 MB to 100 MB; Issue #25

Released - 2020-06-16

  • Interface changes complete; Issue #19

Released - 2020-06-16

  • Changes related to interface update; Issue #19
    • Filter duplicates summary.
      • Different table for different data file types.
    • Works for each file type (official and user).
      • Fails (filters and dups) to varying degrees when switch between file types.

Released - 2020-06-15

  • Modified Filtered Data Summary tab; Issue #19
    • Individually official and user ok.
    • Only have issues when change between them in the same session.

Released - 2020-06-15

  • Modified input data (official vs. user); Issue #19
    • Removed “reset” button as handle internally with a reactiveValues.
    • Filtered Data Summary tab (number of dups and table) still needs work; Issue #19

Released - 2020-06-12

  • Modify filters for user or official files; Issue #19
    • Still some lingering issues with the changes.

Released - 2020-06-12

  • Modify file import to be able to use base files saved in-app; Issue #19
    • Remaining issue of if select upload cannot select ‘official’ file from radio buttons.
      • Added ‘reset’ button but it is not active.

Released - 2020-06-11

  • Error checking for required columns in imported file; Issue #7
  • Revise Error message text for p-value for consistency; Issue #24

Released - 2020-06-10

  • Remove trend map p-value restriction for sum > 1; Issue #24
    • Added in v1.0.0.9016

Released - 2020-06-10

  • Fix range map palatte selection; Issue #21

Released - 2020-06-09

  • Trend map, constrain p-value; Issue #24
    • 0.0 <= p(significant) < p(possible) <= 1.0

Released - 2020-06-07

  • Add trend map p-values to auto-generated title; Issue #10

Released - 2020-06-07

  • Update “save map” button; Issue #9
    • No changes other than formatting and comments.

Released - 2020-06-07

  • Modify range map variable pull-down to descriptive names; Issue #18

Released - 2020-06-07

  • Modify trend map p-values; Issue #10

Released - 2020-05-28

  • Add placeholder code to “open” collapsed filters and map options; Issue #23

Released - 2020-05-28

  • Filter data tab change “entries” to “stations”; Issue #17

Released - 2020-05-28

  • Fix reset filter button display text spelling; Issue #14

Released - 2020-05-28

  • Update map titles in case of multiple selections; Issue #11

Released - 2020-05-28

  • Update Table captions, Issue #15

Released - 2020-05-28

  • Shiny, Issue #16
    • Remove numbers (3a and 3b) from map options headers.

Released - 2020-05-28

  • Shiny, Issue #20
    • Rename ‘1. Import Data’ tab to ‘1. Select Data’.
    • Default to ‘1. Import Data’ tab instead of ‘HELP’.

Released - 2020-05-28

  • README
    • Update install example repo from leppottto tetratech
    • Update install example to use dependencies = TRUE, Issue #22
      • Default of NA does not include packages listed as Suggests in DESCRIPTION
    • Commented out Set.sysenv() since on R v4 and only needed for R v3.6

Released - 2020-05-15

  • Moved GitHub repo from leppott to tetratech.
    • Redo pkgdown.

Released - 2020-04-03

  • Added files for use with Docker.
    • buildspec.yml
    • Dockerfile

Released - 2020-01-29 (work in progress)

  • Updated from rhub::check_for_cran()

    • Title to title case and no ending period.

    • Update maintainer and author names to match.

    • .github folder to .gitbuildignore.

More stuff from check

  • checking installed package size … NOTE installed size is 31.7Mb sub-directories of 1Mb or more: data 3.9Mb extdata 10.0Mb shiny-examples 17.7Mb

License components which are templates and need ‘+ file LICENSE’: MIT

  • checking top-level files … NOTE File LICENSE is not mentioned in the DESCRIPTION file.

Non-standard files/directories found at top level: ‘NEWS.rmd’ ‘README.html’ ‘data-raw’

Released - 2019-11-18

  • Release version with all updates and edits.

  • Update pkgdown website.

Released - 2019-11-18

  • Fix zoom level buffer. Issue #6.

    • Both Trend and Range maps.

Released - 2019-11-18

  • server.R

    • Remove leaflet references

Released - 2019-11-18

  • global.R

    • Remove leaflet package.

Released - 2019-11-18

  • Fix Up Is Good, Issue #5

    • Trend Map, change color only, not direction.
  • ui.R

    • App title to use package version as defined in global.R.

Released - 2019-11-06

  • Fixed Zoom code. Issue #4.

  • Added vignette for use with pkgdown website.

  • DESCRIPTION

    • Add URL of pkgdown website.

Released - 2019-11-06

  • Add custom breaks/classes for range map. Issue #3.

  • Add filtered data set for testing.

  • Zoom code not working so commented out. Issue #4

  • Restructured NEWS.

Released - 2019-11-05

  • Add a pkgdown website.

  • Replace map zoom code with plotly. Issue #4

Released - 2019-10-31

  • Shiny, Maps

    • Add zoom feature, Issue #4

    • Fixed ratio of 1.3 (better sizing).

  • Miscellaneous formatting.

Released - 2019-10-30

  • Shiny

    • Map, Trend, Add point outlines, Issue #2.
  • NEWS

    • Keep NEWS.md file rather than delete.

Released - 2019-10-30

  • Shiny

    • Map, Range, Add point outlines, Issue #2.

    • Update Help text., Issue #1

Released - 2019-10-29

  • Shiny

    • Update Help screen, Issue #1.

Released - 2019-09-24

  • Release stable version with updates.

Released - 2019-09-24

  • Filter

    • Update “clearFilters” button.

Released - 2019-09-24

  • global.R

    • Test map zoom in global.

    • Make Shiny load silently as well.

  • Added 2nd test data file.

  • tab_Data.R

    • Fix typo.
  • Trend map

    • NS points

      • Change “gray” to “dark gray”.
    • Modified (removed debug mode):

      • UpisGood

      • p value significant threshold

      • p value possible threshold

    • Proper map is created for title and river names.

  • Range map

    • “Pretty” option ignores number of breaks.

      • Added error trapping to use number of breaks output from pretty option.
  • Filters

    • Add “ClearFilters” button.

      • Inactive at this point.

Released - 2019-09-19

  • Interim release.

Released - 2019-09-19

  • Trends map

    • Edits to global test.

    • Create Trends tab; similar to Range tab.

    • Create map.

  • Remove dynamic version number from title.

    • Causes Shiny.io to fail.
  • global

    • Base map declare fill color so don’t use scale_fill_manual.
  • tab_Filter

    • Reorder tabs with filter summary before data.

    • Rename data tabs.

Released - 2019-09-18

  • Trends map, legend to include range of values.

  • DESCRIPTION; add packages

    • Add grid, lubridate, and sp
  • global.R

    • Suppress messages

      • library

      • readOGR

      • fortify

  • range map

    • Add button to auto-generate map title based on filtered selections.

    • Make auto-title wrap lines.

    • Add cut (break) numbers to legend.

Released - 2019-09-18

  • Add number of non-“one” entries on “Data Filter Summary” tab.

  • Modifty title to include dynamic package version number.

Released - 2019-09-05

  • DESCRIPTION

    • Reduced required R version from 3.6.0 to 3.2.0.

    • Matches baytrends package.

Released - 2019-09-04

  • Returned to use of shp file.

Released - 2019-09-04

  • GIS shapefile (cbpseg) to RDA.

    • Speed and file size improvement.

Released - 2019-09-03

  • Range map working.

Released - 2019-08-30

  • Range map selection buttons (not finished).

Released - 2019-08-29

  • Range map options.

  • Default Range map.

Released - 2019-08-29

  • Add dplyr package to global and DESCRIPTION.

    • Need for filter summary table.

Released - 2019-08-29

  • Filters working.

  • Structure for maps.

  • Filter summary so can find non-uniques and re-apply filters.

  • Packages to global.R.

  • Package updates to DESCRIPTION.

Released - 2019-08-28

  • Filters and other additions.

Released - 2019-08-26

  • Redesign interface.

Released - 2019-08-23

  • Add test data to create new map.

  • Modify Shiny app to use imported data file.

Released - 2019-08-21

  • Update Readme with usage directions.

Released - 2019-08-21

  • Update Readme with installation directions.

Released - 2019-08-21

  • Updated repository with working files.

  • Rename without underscore to baytrendsmap.

Released - 2019-08-21

  • Initial commit to GitHub